Theses

Ph.D. Theses

  • Amarda Shehu.

    Molecules in Motion: Computing Structural Flexibility.

    Committee: Lydia E. Kavraki (chair), Cecilia Clementi, Luay Nakhleh. Rice University, 2008.

    @phdthesis{shehu2008:PhDThesis, author = {Shehu, A.}, school = {Rice University}, title = {Molecules in Motion: Computing Structural Flexibility}, year = 2008 }

M.Sc. Theses

  • Daniel Veltri.

    Physicochemical Feature Selection for Cathelicidin Antimicrobial Peptides.

    George Mason University, March 2013. Committee: Amarda Shehu (advisor), Iosif Vaisman, and Barney Bishop.

    @masterthesis{veltri2013:MSThesis, address = {Fairfax, Virginia}, author = {Veltri, D.}, school = {George Mason University}, title = {Sequence-based Classification of Antimicrobial Peptides}, year = {2013} }

  • Irina Hashmi.

    A Probabilistic Search Algorithms for Protein-Protein Docking.

    George Mason University, November 2012. Committee: Amarda Shehu (advisor), Kenneth De Jong, and Jyh-Ming, Lien.

    @masterthesis{hashmi2012:MSThesis, address = {Fairfax, Virginia}, author = {Olson, B.}, school = {George Mason University}, title = {A Probabilistic Search Algorithm for Protein-Protein Docking}, year = {2012} }

  • Brian Olson.

    Probabilistic Search Algorithms for Protein Structure Prediction.

    George Mason University, November 2011. Committee: Amarda Shehu (advisor), Jana Kosecka, and Jyh-Ming, Lien.

    @masterthesis{olson2011:MSThesis, address = {Fairfax, Virginia}, author = {Olson, B.}, school = {George Mason University}, title = {Probabilistic Search Algorithms for Protein Structure Prediction}, year = {2011} }

  • Kevin Molloy.

    Variable-Length Fragment Assembly within a Probabilistic Protein Structure Prediction Framework.

    George Mason University, June 2011. Commitee: Amarda Shehu (advisor), Zoran Duric, and Jyh-Ming, Lien.

    @masterthesis{molloy2011:MSThesis, address = {Fairfax, Virginia}, author = {Molloy, K.}, school = {George Mason University}, title = {Variable-Length Fragment Assembly within a Probabilistic Protein Structure Prediction Framework}, year = {2011} }

  • Amarda Shehu.

    Sampling Biomolecular Conformations with Spatial and Geometric Constraints.

    Rice University, 2005. Committee: Lydia E. Kavraki (advisor), Cecilia Clementi, and Luay Nakhleh.

    @masterthesis{shehu2005:MSThesis, address = {Houston, Texas}, author = {Shehu, A.}, school = {Rice University}, title = {Sampling Biomolecular Conformations with Spatial and Energetic Constraints}, year = {2005} }