Publications
Transductive Multi-label Ensemble Classification for Protein Function Prediction,
, ACM SIG Knowledge Discovery and Data Mining (SIG KDD), 08/2012, Beijing, China, (In Press)
Beam Methods for the Profile Hidden Markov Model,
, 2012 SIAM International Conference in Data Mining, 04/2012, Anaheim, CA, p.331-342, (2012)
Efficient Clustering of Metagenomic Sequences using Locality Sensitive Hashing,
, SIAM International Conference in Data Mining, 04/2012, Anaheim, CA, p.1023-1034, (2012)
Abstract
Improving network response times using social information,
, Social Network Analysis and Mining, p.1-12, (2012)
Abstract
Colonic microbiome is altered in alcoholism,
, American Journal of Physiology - Gastrointestinal and Liver Physiology, (2012)
Abstract
Feature Enriched Nonparametric Bayesian Co-clustering,
, PAKDD (1), p.517-529, (2012)
Detection of Communities and Bridges in Weighted Networks,
, MLDM, p.584-598, (2011)
Evaluation of short read metagenomic assembly.,
, BMC Genomics, Volume 12 Suppl 2, Computer Science Department, George Mason University, Fairfax, Virginia, USA. rangwala@cs.gmu.edu., p.S8, (2011)
Abstract
GPU-Euler: Sequence Assembly Using GPGPU,
, HPCC, p.153-160, (2011)
A Hidden Markov Model Variant for Sequence Classification,
, IJCAI, p.1192-1197, (2011)
An Information Theoretic Approach for the Analysis of RNA and DNA Binding Sites,
, BICoB, p.184-189, (2011)
Predicting Network Response Times Using Social Information,
, ASONAM, p.527-531, (2011)
Profiling Microbial Communities using SSU rRNA Sequence and LH-PCR Data,
, BICoB, p.190-195, (2011)
Solid-phase microextraction and the human fecal VOC metabolome.,
, PLoS One, Volume 6, Number 4, Department of Chemistry and Biochemistry, George Mason University, Manassas, Virginia, United States of America., p.e18471, (2011)
Abstract
TAC-ELM: Metagenomic Taxonomic Classification with Extreme Learning Machines,
, BICoB, p.92-97, (2011)
Analysis of multitag pyrosequence data from human cervical lavage samples.,
, Chem Biodivers, Volume 7, Number 5, Microbiome Analysis Center, Manassas, VA 20110, USA., p.1076–1085, (2010)
Abstract
Co-Participation Networks Using Comment Information,
, ICWSM, (2010)
Defining a Coparticipation Network Using Comments on Digg,
, IEEE Intelligent Systems, Volume 25, Number 4, p.36-45, (2010)
Evaluation of short read metagenomic assembly,
, BIBM, p.171-178, (2010)
Introduction to protein structure prediction : methods and algorithms,
, Volume 14, Hoboken, N.J., (2010)
Abstract
Introduction to Protein Structure Prediction: Methods and Algorithms,
, p.165–194, (2010)
Introduction to Protein Structure Prediction: Methods and Algorithms,
, p.1–14, (2010)
Mining manufacturing data for discovery of high productivity process characteristics.,
, J Biotechnol, Volume 147, Number 3-4, Department of Chemical Engineering and Materials Science, University of Minnesota, 421 Washington Avenue SE, Minneapolis, MN 55455-0132, USA., p.186–197, (2010)
Abstract
Multiple Kernel Learning for Fold Recognition,
, BICoB, p.7-12, (2010)
Network-based modeling of the human gut microbiome.,
, Chem Biodivers, Volume 7, Number 5, Microbiome Analysis Center, Manassas, VA 20110, USA., p.1040–1050, (2010)
Abstract
