MLBio+Laboratory Machine Learning in Biomedical Informatics



Publications


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Transductive multi-label ensemble classification for protein function prediction, Yu, Guoxian, Domeniconi Carlotta, Rangwala Huzefa, Zhang Guoji, and Yu Zhiwen , Proceedings of the 18th ACM SIGKDD international conference on Knowledge discovery and data mining, 08/2012, Beijing, China, p.1077–1085, (2012)
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Sparsification and Sampling of Networks for Collective Classification, Saha, Tanwistha, Rangwala Huzefa, and Domeniconi Carlotta , The 2013 International Conference on Social Computing, Behavioral-Cultural Modeling, & Prediction (SBP), 04/2013, Washington, DC, (In Press) Abstract
Multi-label Classification using Adaptive Neighborhoods, Saha, Tanwistha, Rangwala Huzefa, and Domeniconi Carlotta , Eleventh International Conference on Machine Learning and Applications (ICMLA), 12/2012, Boca Raton, FL, (In Press)
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A Map-Reduce Framework for Clustering Metagenomes, Rasheed, Zeehasham, and Rangwala Huzefa , Proceedings of the 12th IEEE International Workshop on High Performance Computational Biology (HiCOMB), 05/2013, Boston, MA, (In Press)
MC-MinH: Metagenome Clustering using Minwise based Hashing, Rasheed, Zeehasham, and Rangwala Huzefa , SIAM International Conference in Data Mining, 04/2013, Austin, TX, (In Press) Abstract
Metagenomic Taxonomic Classification using Extreme Learning Machines. , Rasheed, Zeehasham, and Rangwala Huzefa , Journal of Bioinformatics and Computational Biology, Volume 10, Number 05, p.1250015, (2012)
LSH-Div: Species Diversity Estimation using Locality Sensitive Hashing, Rasheed, Zeehasham, Rangwala Huzefa, and Barbara Daniel , IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 10/2012, Philadelphia, USA, (In Press)
Defining a Coparticipation Network Using Comments on Digg, Rangwala, Huzefa, and Jamali Salman , IEEE Intelligent Systems, Volume 25, Number 4, p.36-45, (2010)
Profile-based direct kernels for remote homology detection and fold recognition., Rangwala, Huzefa, and Karypis George , Bioinformatics, Volume 21, Number 23, Department of Computer Science and Engineering, University of Minnesota Minneapolis, MN 55455, USA., p.4239–4247, (2005) Abstract
fRMSDPred: predicting local RMSD between structural fragments using sequence information., Rangwala, Huzefa, and Karypis George , Comput Syst Bioinformatics Conf, Volume 6, Computer Science & Engineering, University of Minnesota, Minneapolis, MN 55455, USA. rangwala@cs.umn.edu, p.311–322, (2007) Abstract
fRMSDPred: predicting local RMSD between structural fragments using sequence information., Rangwala, Huzefa, and Karypis George , Proteins, Volume 72, Number 3, Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota 55455, USA. rangwala@cs.umn.edu, p.1005–1018, (2008) Abstract


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