CS444 Objectives and Outcomes


  • Instructor: Amarda Shehu amarda\AT\cs.gmu.edu
    Place and Time: Innovation Hall 136, TR 12:00-1:15 pm
    Office Hours: ENG #4422, T 10:00-12:00 pm


  • At the end of this course, students will be able to implement alignment algorithms on protein sequences, modify and implement gene and motif finding algorithms, gather and present statistics on protein structures, implement simple geometric manipulations of protein chains, implement energy functions to rank structures of a protein chain, implement search algorithms to compute protein structures, and apply existing software to dock structures of proteins and ligands.