Journal Articles

[Letter] Research fraud as tort

Science - Thu, 09/24/2015 - 23:00
Author: Enrique Guerra-Pujol
Categories: Journal Articles

[Technical Comment] Comment on “Whole-genome analyses resolve early branches in the tree of life of modern birds”

Science - Thu, 09/24/2015 - 23:00
Jarvis et al. (Research Articles, 12 December 2014, p. 1320) presented molecular clock analyses that suggested that most modern bird orders diverged just after the mass extinction event at the Cretaceous-Paleogene boundary (about 66 million years ago). We demonstrate that this conclusion results from the use of a single inappropriate maximum bound, which effectively precludes the Cretaceous diversification overwhelmingly supported by previous molecular studies. Authors: Kieren J. Mitchell, Alan Cooper, Matthew J. Phillips
Categories: Journal Articles

[Technical Response] Response to Comment on “Whole-genome analyses resolve early branches in the tree of life of modern birds”

Science - Thu, 09/24/2015 - 23:00
Mitchell et al. argue that divergence-time estimates for our avian phylogeny were too young because of an “inappropriate” maximum age constraint for the most recent common ancestor of modern birds and that, as a result, most modern bird orders diverged before the Cretaceous-Paleogene mass extinction event 66 million years ago instead of after. However, their interpretations of the fossil record and timetrees are incorrect. Authors: Joel Cracraft, Peter Houde, Simon Y. W. Ho, David P. Mindell, Jon Fjeldså, Bent Lindow, Scott V. Edwards, Carsten Rahbek, Siavash Mirarab, Tandy Warnow, M. Thomas P. Gilbert, Guojie Zhang, Edward L. Braun, Erich D. Jarvis
Categories: Journal Articles

[Association Affairs] For kids with special learning needs, roadblocks remain

Science - Thu, 09/24/2015 - 23:00
Neuroscience has shed light on the struggle, but early intervention and cost remain challenges Author: Gavin Stern
Categories: Journal Articles

[Introduction to Special Issue] Hunting Mutations, Targeting Disease

Science - Thu, 09/24/2015 - 23:00
Authors: Laura M. Zahn, John Travis
Categories: Journal Articles

[Special Issue News] Can 23andMe have it all?

Science - Thu, 09/24/2015 - 23:00
How much do your eyes water when cutting onions? Does fresh cilantro taste like soap to you? Do you have stretch marks on your hips, thighs, or the backs of your arms? Have you ever been diagnosed with brain cancer? Mail off your spit for a $99 genetic analysis from 23andMe, and you will get information about your ancestry, served up on a web account. You will also encounter a list of optional survey questions. A lot of survey questions. Some are quirky queries about your tastes and habits. Others are intimate probes into your experiences with disease and medicine. Author: Kelly Servick
Categories: Journal Articles

[Special Issue News] Who has your DNA—or wants it

Science - Thu, 09/24/2015 - 23:00
As DNA sequencing gets cheaper, more and more organizations, companies, and countries are amassing computer server–busting amounts of human DNA data, typically for studies of the links between genes, lifestyle factors and disease risk. Science's informal survey found at least 17 biobanks that hold—or plan to hold—genomic data on 75,000 or more people who have volunteered to share their health information for research. The data range from scans of common mutations known as single nucleotide polymorphisms (SNPs) to the protein-coding portions (exomes) to whole genome sequences. Here we have highlighted many of these efforts taking shape across the globe. Author: Jocelyn Kaiser
Categories: Journal Articles

[Special Issue Review] The origins, determinants, and consequences of human mutations

Science - Thu, 09/24/2015 - 23:00
Germline mutations are the principal cause of heritable disease and the ultimate source of evolutionary change. Similarly, somatic mutations are the primary cause of cancer and may contribute to the burden of human disease more broadly than previously appreciated. Here, we review recent insights into the rates, spectrum, and determinants of genomic mutations and how these parameters inform our understanding of both Mendelian and complex human diseases. We also consider models for conceptualizing mutational consequences and outline several key areas for future research, including the development of new technologies to access and quantify the full spectrum of mutations, as well as to better interpret the consequences of mutations with respect to molecular functionality, evolutionary fitness, and disease pathogenicity. Authors: Jay Shendure, Joshua M. Akey
Categories: Journal Articles

[Special Issue Review] Somatic mutation in cancer and normal cells

Science - Thu, 09/24/2015 - 23:00
Spontaneously occurring mutations accumulate in somatic cells throughout a person’s lifetime. The majority of these mutations do not have a noticeable effect, but some can alter key cellular functions. Early somatic mutations can cause developmental disorders, whereas the progressive accumulation of mutations throughout life can lead to cancer and contribute to aging. Genome sequencing has revolutionized our understanding of somatic mutation in cancer, providing a detailed view of the mutational processes and genes that drive cancer. Yet, fundamental gaps remain in our knowledge of how normal cells evolve into cancer cells. We briefly summarize a number of the lessons learned over 5 years of cancer genome sequencing and discuss their implications for our understanding of cancer progression and aging. Authors: Iñigo Martincorena, Peter J. Campbell
Categories: Journal Articles

[Special Issue Review] Genetics and genomics of psychiatric disease

Science - Thu, 09/24/2015 - 23:00
Large-scale genomic investigations have just begun to illuminate the molecular genetic contributions to major psychiatric illnesses, ranging from small-effect-size common variants to larger-effect-size rare mutations. The findings provide causal anchors from which to understand their neurobiological basis. Although these studies represent enormous success, they highlight major challenges reflected in the heterogeneity and polygenicity of all of these conditions and the difficulty of connecting multiple levels of molecular, cellular, and circuit functions to complex human behavior. Nevertheless, these advances place us on the threshold of a new frontier in the pathophysiological understanding, diagnosis, and treatment of psychiatric disease. Authors: Daniel H. Geschwind, Jonathan Flint
Categories: Journal Articles

[Special Issue Review] What is new in mitochondrial disease, and what challenges remain?

Science - Thu, 09/24/2015 - 23:00
Mitochondrial diseases are among the most common and most complex of all inherited genetic diseases. The involvement of both the mitochondrial and nuclear genome presents unique challenges, but despite this there have been some remarkable advances in our knowledge of mitochondrial diseases over the past few years. A greater understanding of mitochondrial genetics has led to improved diagnosis as well as novel ways to prevent transmission of severe mitochondrial disease. These and other advances have had a major impact on patient care, but considerable challenges remain, particularly in the areas of therapies for those patients manifesting clinical symptoms associated with mitochondrial dysfunction and the tissue specificity seen in many mitochondrial disorders. This review highlights some important recent advances in mitochondrial disease but also stresses the areas where progress is essential. Authors: Robert N. Lightowlers, Robert W. Taylor, Doug M. Turnbull
Categories: Journal Articles

[This Week in Science] Visualizing edge states in atomic systems

Science - Thu, 09/24/2015 - 23:00
Author: Jelena Stajic
Categories: Journal Articles

[This Week in Science] Dissecting the mitochondrial entry portal

Science - Thu, 09/24/2015 - 23:00
Author: Stella M. Hurtley
Categories: Journal Articles

[This Week in Science] Interactions that slow protein folding

Science - Thu, 09/24/2015 - 23:00
Author: Valda Vinson
Categories: Journal Articles

[This Week in Science] Flat perovskite crystals

Science - Thu, 09/24/2015 - 23:00
Author: Phil Szuromi
Categories: Journal Articles

[This Week in Science] Placing bounds on gravity wave detection

Science - Thu, 09/24/2015 - 23:00
Author: Ian S. Osborne
Categories: Journal Articles

[This Week in Science] Mitochondria signal ‘eat me’

Science - Thu, 09/24/2015 - 23:00
Author: John F. Foley
Categories: Journal Articles
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